Programas de bioinformática disponíveis
abyss |
AllPaths |
allpathslg |
amber |
argtable |
augustus |
bamtools |
bcl2fastq |
beagle |
BEAR_release |
BEAST |
BEDTools |
berkeley |
Biom-format |
biopython |
bio-tools-psort-all |
blast |
blat |
blatSrc |
bless-V0 |
boost |
bowtie |
BRIG |
BUSCO |
bwa |
CAP3 |
CASAVA |
CEGMA |
chlorop |
clclicsrv |
clean_reads |
Clustal-omega |
clustalw |
coral |
crest |
cufflinks |
curl |
Cytoscape |
DRISEE-master |
emboss |
exonerate |
fastaf |
FastQC |
fastx |
fftw |
FRED |
GapCloser |
GATK |
geneid |
glu-1.0b1 |
gmap |
Gmap-gsnap |
gparted- |
gromacs |
hmmer |
HTSeq |
htslib |
Hydra |
idba |
IGV |
IGVDistribution |
IGVTools |
impute |
interpro |
interproscan |
iprscan |
ITSx |
Jcvi-sift |
khmer |
kmergenie |
mach |
maker |
maq |
maqview |
matplotlib |
mauve |
mavid |
mcl |
mdust |
metAMOS |
MetaVelvet |
mgkit |
mira |
mmseq-master |
mothur |
mpc |
mpich |
mrbayes |
mugsy |
mummer |
muscle |
Ncbi-blast |
Ncbi-rmblastn |
NGS-SNP |
nph-sw_request?secretomep |
ntdpal |
ntthal |
oligotm |
oracle |
orthomclSoftware |
osprey |
PAGIT |
parallel |
Parallel-ForkManager |
pathwaytools |
pauda |
pftools |
phobius |
phrap |
phylip |
phyml |
Picard-tools |
pip |
platypus |
primer3 |
prinseq |
prop |
psipred |
psort2 |
psubprocess |
pylint.out |
pysam |
Python |
Qiime |
qiime-deploy |
queuelib |
R-2.14 |
RACER |
Ray |
R-devel |
RepeatMasker |
rmaexpress |
rsem |
Rstudio-server |
ruffus |
saet |
sample_data |
samstat |
samtools |
screed |
secretomep |
seg |
seq_crumbs |
seqclean |
SeqPrep |
seqtk |
seqtrim |
sequin.linux |
seqware |
setuptools |
sga-master |
SherLoc |
SHRiMP |
signalp |
smartmontools |
snap |
snp_sites-master |
snpEff |
soap2.21release |
SOAPdenovo |
sortmerna |
SPAdes |
SPANDx |
split_sangff.sh |
squizz |
sra_sdk |
sratoolkit |
src |
Stampy |
SVDetect |
tabix |
targetp |
T-coffee |
TMAP |
tmhmm |
Tophat |
trf404.linux64 |
trimmomatic |
trinityrnaseq |
Trinotate |
trnascan |
ugene |
uparse |
usearch |
usearch7 |
usearch8 |
varid |
varscan |
vcftools |
velvet |
virtualenv |
VirVarSeq |
vsearch |
WebApollo |
weblogo |
wise |
wu-blast |